TITLE

Comparative sequence analysis of Solanum and Arabidopsis in a hot spot for pathogen resistance on potato chromosome V reveals a patchwork of conserved and rapidly evolving genome segments

PUB. DATE
January 2007
SOURCE
BMC Genomics;2007, Vol. 8, p112
SOURCE TYPE
Academic Journal
DOC. TYPE
Article
ABSTRACT
No abstract available.
ACCESSION #
43689978

 

Related Articles

  • Potato chromosomes IX and XI carry genes for resistance to potato virus M. Marczewski, W.; Strzelczyk-Żyta, D.; Hennig, J.; Witek, K.; Gebhardt, C. // Theoretical & Applied Genetics;May2006, Vol. 112 Issue 7, p1232 

    Two new loci for resistance to potato virus M (PVM), Gm and Rm, have been mapped in potato. The gene Gm was derived from Solanum gourlayi, whereas, Solanum megistacrolobum is the source of the gene Rm. Gm confers resistance to PVM infection after mechanical inoculation. Rm induces a...

  • A disease resistance locus on potato and tomato chromosome 4 exhibits a conserved multipartite structure displaying different rates of evolution in different lineages. Destefanis, Marialaura; Nagy, Istvan; Rigney, Brian; Bryan, Glenn J.; McLean, Karen; Hein, Ingo; Griffin, Denis; Milbourne, Dan // BMC Plant Biology;10/24/2015, Vol. 15, p1 

    Background: In plant genomes, NB-LRR based resistance (R) genes tend to occur in clusters of variable size in a relatively small number of genomic regions. R-gene sequences mostly differentiate by accumulating point mutations and gene conversion events. Potato and tomato chromosome 4 harbours a...

  • Comparison between a coffee single copy chromosomal region and Arabidopsis duplicated counterparts evidenced high level synteny between the coffee genome and the ancestral Arabidopsis genome. Laetitia Mahé; Marie-Christine Combes; Philippe Lashermes // Plant Molecular Biology;Aug2007, Vol. 64 Issue 6, p699 

    Abstract  The Arabidopsis thaliana genome sequence provides a catalogue of reference genes that can be used for comparative analysis of other species thereby facilitating map-based cloning in economically important crops. We made use of a coffee bacterial artificial chromosome...

  • A physical map of the papaya genome with integrated genetic map and genome sequence. Qingyi Yu; Tong, Eric; Skelton, Rachel L.; Bowers, John E.; Jones, Meghan R.; Murray, Jan E.; Shaobin Hou; Peizhu Guan; Acob, Ricelle A.; Ming-Cheng Luo; Moore, Paul H.; Alam, Maqsudul; Paterson, Andrew H.; Ray Ming // BMC Genomics;2009, Vol. 10, p371 

    Background: Papaya is a major fruit crop in tropical and subtropical regions worldwide and has primitive sex chromosomes controlling sex determination in this trioecious species. The papaya genome was recently sequenced because of its agricultural importance, unique biological features, and...

  • Genomic analysis of the native European Solanum species, S. dulcamara. D'Agostino, Nunzio; Golas, Tomek; Van de Geest, Henri; Bombarely, Aureliano; Dawood, Thikra; Zethof, Jan; Driedonks, Nicky; Wijnker, Erik; Bargsten, Joachim; Nap, Jan-Peter; Mariani, Celestina; Rieu, Ivo // BMC Genomics;2013, Vol. 14 Issue 1, p1 

    Background: Solanum dulcamara (bittersweet, climbing nightshade) is one of the few species of the Solanaceae family native to Europe. As a common weed it is adapted to a wide range of ecological niches and it has long been recognized as one of the alternative hosts for pathogens and pests...

  • Microstructure of a Brassica rapa genome segment homoeologous to the resistance gene cluster on Arabidopsis chromosome 4. Suwabet, Keita; Suzuki, Go; Nunome, Tsukasa; Hatakeyama, Katsunori; Mukai, Yasuhiko; Fukuoka, Hiroyuki; Matsumoto, Satoru // Breeding Science;Jun2012, Vol. 62 Issue 2, p170 

    Genome evolution is a continuous process and genomic rearrangement occurs both within and between species. With the sequencing of the Arabidopsis thaliana genome, comparative genetics and genomics offer new insights into plant biology. The genus Brassica offers excellent opportunities with which...

  • Analysis of 90 Mb of the potato genome reveals conservation of gene structures and order with tomato but divergence in repetitive sequence composition. Wei Zhu; Shu Ouyang; Iovene, Marina; O'Brien, Kimberly; Hue Vuong; Jiming Jiang; Buell, C. Robin // BMC Genomics;2008, Vol. 9, Special section p1 

    Background: The Solanaceae family contains a number of important crop species including potato (Solanum tuberosum) which is grown for its underground storage organ known as a tuber. Albeit the 4th most important food crop in the world, other than a collection of ~220,000 Expressed Sequence Tags,...

  • Segmental Structure of the Brassica napus Genome Based on Comparative Analysis With Arabidopsis thaliana. Parkin, Isobel A. P; Gulden, Sigrun M.; Sharpe, Andrew G.; Lukens, Lewis; Trick, Martin; Osborn, Thomas C.; Lydiate, Derek J. // Genetics;Oct2005, Vol. 171 Issue 2, p765 

    Over 1000 genetically linked RFLP loci in Brassica napus were mapped to homologous positions in the Arabidopsis genome on the basis of sequence similarity. Blocks of genetically linked loci in B. napus frequently corresponded to physically linked markers in Arabidopsis. This comparative analysis...

  • Introgression of bacterial wilt resistance from eggplant to potato via protoplast fusion and genome components of the hybrids. Yu, Yan; Ye, Wenxuan; He, Li; Cai, Xingkui; Liu, Ting; Liu, Jun // Plant Cell Reports;Nov2013, Vol. 32 Issue 11, p1687 

    Key message: Bacterial wilt resistant somatic hybrids were obtained via protoplast fusion between potato and eggplant and three types of nuclear genomes were identified in the hybrids through GISH and SSR analysis. Abstract: Cultivated potato ( Solanum tuberosum L.) lacks resistance to bacterial...

  • Recombination Rate Heterogeneity within Arabidopsis Disease Resistance Genes. Choi, Kyuha; Reinhard, Carsten; Serra, Heïdi; Ziolkowski, Piotr A.; Underwood, Charles J.; Zhao, Xiaohui; Hardcastle, Thomas J.; Yelina, Nataliya E.; Griffin, Catherine; Jackson, Matthew; Mézard, Christine; McVean, Gil; Copenhaver, Gregory P.; Henderson, Ian R. // PLoS Genetics;7/14/2016, Vol. 12 Issue 7, p1 

    Meiotic crossover frequency varies extensively along chromosomes and is typically concentrated in hotspots. As recombination increases genetic diversity, hotspots are predicted to occur at immunity genes, where variation may be beneficial. A major component of plant immunity is recognition of...

Share

Read the Article

Courtesy of THE LIBRARY OF VIRGINIA

Sorry, but this item is not currently available from your library.

Try another library?
Sign out of this library

Other Topics