TITLE

Diversity and structure of PIF/Harbinger-like elements in the genome of Medicago truncatula

PUB. DATE
January 2007
SOURCE
BMC Genomics;2007, Vol. 8, p409
SOURCE TYPE
Academic Journal
DOC. TYPE
Article
ABSTRACT
No abstract available.
ACCESSION #
34971277

 

Related Articles

  • Exploring structural variation and gene family architecture with De Novo assemblies of 15 Medicago genomes. Peng Zhou; Silverstein, Kevin A. T.; Ramaraj, Thiruvarangan; Guhlin, Joseph; Denny, Roxanne; Junqi Liu; Farmer, Andrew D.; Steele, Kelly P.; Stupar, Robert M.; Miller, Jason R.; Tiffin, Peter; Mudge, Joann; Young, Nevin D. // BMC Genomics;3/27/2017, Vol. 18, p1 

    Background: Previous studies exploring sequence variation in the model legume, Medicago truncatula, relied on mapping short reads to a single reference. However, read-mapping approaches are inadequate to examine large, diverse gene families or to probe variation in repeat-rich or highly...

  • Genome sequence of the Medicago-nodulating Ensifer meliloti commercial inoculant strain RRI128. Reeve, Wayne; Ballard, Ross; Drew, Elizabeth; Tian, Rui; Bräu, Lambert; Goodwin, Lynne; Huntemann, Marcel; Han, James; Tatiparthi, Reddy; Chen, Amy; Mavrommatis, Konstantinos; Markowitz, Victor; Palaniappan, Krishna; Ivanova, Natalia; Pati, Amrita; Woyke, Tanja; Kyrpides, Nikos // Standards in Genomic Sciences;Nov2014, Vol. 9 Issue 3, p602 

    Ensifer meliloti strain RRI128 is an aerobic, motile, Gram-negative, non-spore-forming rod. RRI128 was isolated from a nodule recovered from the roots of barrel medic ( Medicago truncatula) grown in the greenhouse and inoculated with soil collected from Victoria, Australia. The strain is used in...

  • Transferability of SSR markers from distantly related legumes to Glycyrrhiza species. ERAYMAN, Mustafa; İLHAN, Emre; GÜZEL, Yelda; EREN, Abdil Hakan // Turkish Journal of Agriculture & Forestry;2/1/2014, Vol. 38 Issue 1, p32 

    Licorice (Glycyrrhiza spp.) is an important medicinal plant and its distribution of natural habitats has been shrinking day by day due to extensive collection. Genetic diversity identification will likely assist in conserving the different Glycyrrhiza species. A total of 127 simple sequence...

  • Recent Progress in Development of Tnt1 Functional Genomics Platform for Medicago truncatula and Lotus japonicus in Bulgaria. Revalska, Miglena; Vassileva, Valya; Goormachtig, Sofie; Van Hautegem, Tom; Ratet, Pascal; Iantcheva, Anelia // Current Genomics;Apr2011, Vol. 12 Issue 2, p147 

    Legumes, as protein-rich crops, are widely used for human food, animal feed and vegetable oil production. Over the past decade, two legume species, Medicago truncatula and Lotus japonicus, have been adopted as model legumes for genomics and physiological studies. The tobacco transposable...

  • Combining ecophysiological and microbial ecological approaches to study the relationship between Medicago truncatula genotypes and their associated rhizosphere bacterial communities. Zancarini, A.; Mougel, C.; Terrat, S.; Salon, C.; Munier-Jolain, N. // Plant & Soil;Apr2013, Vol. 365 Issue 1/2, p183 

    Background and aims: To assess how plant genotype and rhizosphere bacterial communities may interact, the genetic structure and diversity of bacterial communities in the rhizosphere soil of different Medicago truncatula genotypes were studied in relation to the plant carbon and nitrogen...

  • Genome-wide analysis of the CCCH zinc finger gene family in Medicago truncatula. Zhang, Cuiqin; Zhang, Hongmei; Zhao, Yang; Jiang, Haiyang; Zhu, Suwen; Cheng, Beijiu; Xiang, Yan // Plant Cell Reports;Oct2013, Vol. 32 Issue 10, p1543 

    Key message: In this study, we identified 34 CCCH Znf genes in Medicago truncatula and the results of semi-quantitative RT-PCR revealed that the expression patterns of subfamily VI members were diverse. Abstract: CCCH-type zinc finger (Znf) proteins are specific transcriptional factors with a...

  • Transcriptome sequencing for high throughput SNP development and genetic mapping in Pea. Duarte, Jorge; Rivière, Nathalie; Baranger, Alain; Aubert, Grégoire; Burstin, Judith; Cornet, Laurent; Lavaud, Clément; Hénaut, Isabelle Lejeune; Martinant, Jean-Pierre; Pichon, Jean-Philippe; Nayel, Marie-Laure Pilet; Boutet, Gilles // BMC Genomics;2014, Vol. 15 Issue 1, p1 

    Background Pea has a complex genome of 4.3 Gb for which only limited genomic resources are available to date. Although SNP markers are now highly valuable for research and modern breeding, only a few are described and used in pea for genetic diversity and linkage analysis. Results We developed a...

  • Medicago truncatula transporter database: a comprehensive database resource for M. truncatula transporters.  // BMC Genomics;2012, Vol. 13 Issue 1, p60 

    The article focuses on a study regarding Medicago truncatula transporter database (MTTB), which found that the MTDB enables the exploration and comparative analysis of putative transporters in M. truncatula. On the basis of International Medicago Genome Annotated Group (IMGAG) V3.5 V3 and the M....

  • Chapter 34: Genetic Maps and Molecular Markers in the Genus Medicago. Julier, Bernadette; Huguet, Thierry // Handbook of New Technologies for Genetic Improvement of Legumes;2007, p559 

    Chapter 34 of the "Handbook of New Technologies for Genetic Improvement of Legumes" is presented. It focuses on genetic maps and molecular markers in the genus Medicago, which are used in the analysis of genomes and quantitative traits. An overview of the advances in mapping programs on both M....

  • Comparison of homoeolocus organisation in paired BAC clones from white clover (Trifolium repens L.) and microcolinearity with model legume species. Hand, Melanie L.; Cogan, Noel O. I.; Sawbridge, Timothy I.; Spangenberg, German C.; Forster, John W. // BMC Plant Biology;2010, Vol. 10, p94 

    Background: White clover (Trifolium repens L.) is an outbreeding allotetraploid species and an important forage legume in temperate grassland agriculture. Comparison of sub-genome architecture and study of nucleotide sequence diversity within allopolyploids provides insight into evolutionary...

Share

Read the Article

Courtesy of THE LIBRARY OF VIRGINIA

Sorry, but this item is not currently available from your library.

Try another library?
Sign out of this library

Other Topics